Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_311

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_311: 8679 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 737521 to 741046 8679 mRNA_312: 8680 - K20103 DDX60 ATP-dependent RNA helicase DDX60, at 741330 to 747566 8680

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
736,621 + -0.8
736,621 - 0.4
736,662 - 0.5
736,747 + 2.1
736,766 + 0.8
736,936 - 0.9
736,988 + -1.3
737,567 - 1.3
737,986 - 8679 mRNA_311 0.13 -0.5
738,594 + 8679 mRNA_311 0.30 1.0
738,727 - 8679 mRNA_311 0.34 -0.2
738,775 - 8679 mRNA_311 0.36 0.1
738,776 + 8679 mRNA_311 0.36 0.4
739,001 + 8679 mRNA_311 0.42 0.4
739,316 - 8679 mRNA_311 0.51 -0.3
739,343 - 8679 mRNA_311 0.52 0.3
739,346 + 8679 mRNA_311 0.52 0.6
739,478 - 8679 mRNA_311 0.56 0.2
739,615 + 8679 mRNA_311 0.59 2.3
739,808 + 8679 mRNA_311 0.65 -0.2
740,055 + 8679 mRNA_311 0.72 1.0
740,190 + 8679 mRNA_311 0.76 1.2
740,440 - 8679 mRNA_311 0.83 -0.3
740,467 - 8679 mRNA_311 0.84 0.3
740,595 - 8679 mRNA_311 0.87 1.3
740,926 - 0.2
740,930 - 0.1
741,064 - 0.9
741,064 - 0.2
741,066 - -0.6
741,067 - 0.3
741,068 - 1.8
741,085 + -0.6
741,325 - -0.7
741,330 - 0.4
741,331 - 0.7
741,342 + 0.3
741,350 - 0.0
741,350 - 0.7
741,352 - -1.4
741,357 + 0.5
741,359 - 0.1
741,361 + 2.4
741,366 + -0.2