Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_298

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_298: 8666 - KOG0725 Reductases with broad range of substrate specificities, at 705560 to 707244 8666 mRNA_299: 8667 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 707483 to 708587 8667

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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705,303 - 0.8
705,430 - 0.1
705,445 + 0.6
706,045 - 8666 mRNA_298 0.29 0.1
706,138 + 8666 mRNA_298 0.34 -0.6
706,171 - 8666 mRNA_298 0.36 -0.5
706,321 - 8666 mRNA_298 0.45 1.3
706,485 + 8666 mRNA_298 0.55 0.5
706,614 - 8666 mRNA_298 0.63 -0.2
706,917 - 8666 mRNA_298 0.81 0.1
707,073 - 8666 mRNA_298 0.90 0.8
707,093 + 1.4
707,187 + -0.1
707,204 - 0.4
707,334 - -0.6
707,336 - -2.2
707,350 - -0.2
707,364 - 0.5
707,389 + 0.3
707,417 - -0.1
707,426 + 0.3
707,427 - -0.3
707,427 - -0.5
707,538 - -0.3
707,581 + 0.5
707,690 - 8667 mRNA_299 0.19 0.2
707,691 - 8667 mRNA_299 0.19 0.7
707,695 + 8667 mRNA_299 0.19 0.1
707,696 + 8667 mRNA_299 0.19 -0.4
707,833 - 8667 mRNA_299 0.32 0.9
707,838 + 8667 mRNA_299 0.32 -0.3
707,866 + 8667 mRNA_299 0.35 0.2
708,024 + 8667 mRNA_299 0.49 -0.5
708,025 + 8667 mRNA_299 0.49 2.2
708,158 - 8667 mRNA_299 0.61 -0.5