Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_280

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_279: 8647 - K02908 RP-L30e, RPL30 large subunit ribosomal protein L30e, at 665902 to 666990 8647 mRNA_280: 8648 - Hypothetical Protein, at 667425 to 668296 8648

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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667,562 - 8648 mRNA_280 0.16 0.1
667,620 - 8648 mRNA_280 0.22 0.5
667,808 - 8648 mRNA_280 0.44 0.3
667,845 + 8648 mRNA_280 0.48 -0.4
667,915 + 8648 mRNA_280 0.56 -0.1
667,946 - 8648 mRNA_280 0.60 0.9
667,959 - 8648 mRNA_280 0.61 -0.4
668,114 - 8648 mRNA_280 0.79 0.9
668,233 - 0.3
668,236 - 0.8
668,242 + -0.9
668,262 + 0.7
668,298 + -0.4
668,386 + 2.4
668,462 - -1.1
668,483 - 0.2
668,499 + 0.0
668,499 + 0.3
668,509 + -1.9
668,522 + 0.5
668,530 - 0.1
668,548 - 0.4
668,553 - 0.2
668,577 + 0.6
668,640 + 0.4
668,651 + 0.3
668,658 + -1.9
668,679 + 1.2
668,955 + 0.7
669,012 - 0.2
669,015 - 0.4