Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_240

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_239: 8607 - K01809 manA, MPI mannose-6-phosphate isomerase, at 585824 to 587660 8607 mRNA_240: 8608 - KOG0254 Predicted transporter (major facilitator superfamily), at 588518 to 590085 8608 mRNA_241: 8609 - BLAST 60s ribosomal protein l25 [Moniliophthora roreri ..., at 590351 to 590973 8609

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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587,649 - -0.2
587,673 - -0.6
587,814 + 0.1
587,820 + 0.3
587,834 + 0.7
587,845 + -0.0
588,000 - 0.2
588,113 - 0.4
588,257 - 0.5
588,263 + -0.0
588,271 + -0.3
588,414 + 0.4
588,552 + -0.2
588,906 + 8608 mRNA_240 0.25 -0.9
588,992 + 8608 mRNA_240 0.30 0.1
589,440 - 8608 mRNA_240 0.59 0.8
589,602 - 8608 mRNA_240 0.69 0.9
589,867 + 8608 mRNA_240 0.86 0.2
590,012 + 0.7
590,036 + 0.2
590,037 + 0.2
590,156 - 0.1
590,285 - 0.6
590,297 - 0.6
590,299 + -1.2
590,300 - -0.3
590,306 + 1.1
590,313 + 0.6
590,322 + -0.8
590,323 + 0.7
590,326 - 0.0
590,327 - -0.3
590,335 + 0.4
590,345 + -0.3
591,023 - 0.3