Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_205

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_203: 8571 - SUPERFAMILY--SSF51197, at 499764 to 500298 8571 mRNA_204: 8572 - Hypothetical Protein, at 500316 to 500871 8572 mRNA_205: 8573 - KOG4267 Predicted membrane protein, at 501072 to 501667 8573

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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500,100 + 8571 mRNA_203 0.63 -0.1
500,110 + 8571 mRNA_203 0.65 0.0
500,274 - 0.1
500,401 - 8572 mRNA_204 0.15 0.1
500,425 - 8572 mRNA_204 0.20 0.7
500,538 - 8572 mRNA_204 0.40 0.6
500,549 - 8572 mRNA_204 0.42 0.2
500,550 + 8572 mRNA_204 0.42 -0.0
500,553 - 8572 mRNA_204 0.43 0.3
500,553 - 8572 mRNA_204 0.43 0.3
500,563 - 8572 mRNA_204 0.44 0.3
500,566 - 8572 mRNA_204 0.45 0.6
500,566 - 8572 mRNA_204 0.45 1.7
500,573 - 8572 mRNA_204 0.46 0.1
500,608 - 8572 mRNA_204 0.53 0.1
500,633 + 8572 mRNA_204 0.57 -0.1
500,660 + 8572 mRNA_204 0.62 0.1
500,710 + 8572 mRNA_204 0.71 -0.5
500,712 - 8572 mRNA_204 0.71 -0.0
500,858 - 0.5
500,959 - 0.7
500,963 - -0.0
500,974 + 1.0
501,553 + 8573 mRNA_205 0.81 0.4
501,565 - 8573 mRNA_205 0.83 1.9
501,578 - 8573 mRNA_205 0.85 0.3
501,981 + 1.8
502,023 + 0.4
502,161 - 0.2
502,162 + 1.1
502,188 - 0.3
502,409 + 0.1