Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_189

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_188: 8556 - K14536 RIA1 ribosome assembly protein 1, at 455692 to 459820 8556 mRNA_189: 8557 - Hypothetical Protein, at 460465 to 463611 8557 mRNA_190: 8558 - K09526 DNAJC6 DnaJ homolog subfamily C member 6, at 463737 to 466686 8558

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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459,937 - 0.4
460,074 + 0.2
460,219 + 0.3
460,222 - -0.5
460,230 + 0.1
460,360 + 0.1
460,369 - 0.3
460,381 - -0.7
460,403 + -0.4
460,412 + -0.0
460,562 + 0.2
460,802 - 8557 mRNA_189 0.11 1.2
460,821 - 8557 mRNA_189 0.11 1.6
460,822 + 8557 mRNA_189 0.11 1.0
460,993 + 8557 mRNA_189 0.17 -0.2
461,983 - 8557 mRNA_189 0.48 0.1
462,132 + 8557 mRNA_189 0.53 0.4
462,438 + 8557 mRNA_189 0.63 0.9
462,839 - 8557 mRNA_189 0.75 -0.3
463,299 - -0.2
463,340 - 0.5
463,459 - -0.1
463,473 + 0.3