Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_160

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_159: 8527 - Hypothetical Protein, at 394494 to 395592 8527 mRNA_160: 8528 - K05349 bglX beta-glucosidase, at 396327 to 398883 8528 mRNA_161: 8529 - KOG1727 Microtubule-binding protein (translationally controlled tumor protein), at 399773 to 400854 8529

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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395,573 + 0.2
395,686 + 0.0
396,176 + -0.0
396,607 + 8528 mRNA_160 0.11 -0.1
396,692 - 8528 mRNA_160 0.14 0.4
397,006 + 8528 mRNA_160 0.27 -1.3
397,347 + 8528 mRNA_160 0.40 -0.2
397,488 + 8528 mRNA_160 0.45 0.2
397,903 - 8528 mRNA_160 0.62 -1.3
398,054 + 8528 mRNA_160 0.68 1.0
398,343 + 8528 mRNA_160 0.79 -0.7
398,486 - 8528 mRNA_160 0.84 -0.3
398,504 + 8528 mRNA_160 0.85 -1.5
398,688 + 1.0
398,995 - 0.6
399,262 + 0.8
399,284 - 0.9