Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_67

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_66: 8434 - K15118 SLC25A38 solute carrier family 25, member 38, at 154666 to 156000 8434 mRNA_67: 8435 - K05864 PPID, CYPD peptidyl-prolyl isomerase D, at 156273 to 158120 8435 mRNA_68: 8436 - K12599 SKI2, SKIV2L antiviral helicase SKI2, at 158685 to 163751 8436

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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155,507 + 8434 mRNA_66 0.63 0.5
155,513 - 8434 mRNA_66 0.63 -0.6
155,516 + 8434 mRNA_66 0.64 -0.2
155,629 + 8434 mRNA_66 0.72 0.7
155,729 + 8434 mRNA_66 0.80 0.2
156,004 - 0.3
156,035 + 0.5
156,173 + -0.0
156,304 + -0.2
156,319 + 0.6
156,334 - 1.0
156,617 + 8435 mRNA_67 0.19 0.6
157,257 - 8435 mRNA_67 0.53 0.3
157,262 - 8435 mRNA_67 0.54 0.9
157,297 - 8435 mRNA_67 0.55 -0.3
157,309 + 8435 mRNA_67 0.56 0.4
157,309 + 8435 mRNA_67 0.56 0.1
157,453 + 8435 mRNA_67 0.64 -0.3
157,467 - 8435 mRNA_67 0.65 0.9
157,482 - 8435 mRNA_67 0.65 0.8
157,655 + 8435 mRNA_67 0.75 -1.4
157,835 - 8435 mRNA_67 0.85 0.1
157,966 - -0.2
158,031 + 0.4
158,054 + 0.8
158,069 - 1.3
158,176 + -0.1
158,177 - 1.9
158,179 - 0.1
158,183 - 0.8
158,192 - 0.8
158,193 + 0.9
158,193 + 0.5
158,196 - 1.9
158,296 + 0.2
158,320 - 1.1
158,333 + -0.0
158,341 - -0.1
158,347 - -0.1
158,387 + -0.7
158,636 + 0.7
158,639 - 1.0
158,650 - -0.2
158,678 + -1.1
158,949 - -0.0
159,101 - 1.4