Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_61

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_60: 8428 - Hypothetical Protein, at 142423 to 142761 8428 mRNA_61: 8429 - SUPERFAMILY--SSF52047, at 143371 to 144965 8429 mRNA_62: 8430 - HMMPfam-HPP family-PF04982, at 145631 to 146829 8430

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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142,688 - 8428 mRNA_60 0.78 -1.1
142,706 + 8428 mRNA_60 0.83 0.6
143,007 + 0.1
143,119 + 1.4
143,119 - 0.5
143,397 - -0.7
143,399 - 0.2
143,401 + 0.7
143,408 - 0.8
143,426 + 0.1
143,559 + 8429 mRNA_61 0.12 0.4
143,986 + 8429 mRNA_61 0.39 1.3
144,260 - 8429 mRNA_61 0.56 0.9
144,288 + 8429 mRNA_61 0.57 0.7
144,296 + 8429 mRNA_61 0.58 0.5
144,433 + 8429 mRNA_61 0.67 -0.7
144,441 + 8429 mRNA_61 0.67 -0.5
144,635 + 8429 mRNA_61 0.79 -1.6
144,738 + 8429 mRNA_61 0.86 0.3
144,862 - -0.5
144,870 + 1.3
144,873 - -1.2
144,880 + -0.2
144,881 - -0.4
145,005 + 0.6
145,026 - -0.1
145,033 + 0.6
145,043 - 1.0
145,047 - 1.5
145,049 + 0.8
145,175 - 0.4
145,201 + 0.5
145,206 - -0.2
145,337 + -0.1
145,344 - -0.6
145,344 + 0.9
145,350 + 0.4
145,453 + 0.2
145,471 + -0.3
145,476 - 0.5
145,483 - 0.8
145,493 - 0.3
145,495 + 0.7
145,632 + -0.1
145,640 + 1.8
145,645 + -1.2
145,788 - 8430 mRNA_62 0.13 -0.0
145,955 + 8430 mRNA_62 0.27 -0.4