Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_29

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_28: 8396 - Hypothetical Protein, at 72914 to 73928 8396 mRNA_29: 8397 - HMMPfam-Swi5-PF07061, at 74095 to 74821 8397 mRNA_30: 8398 - KOG2798 Putative trehalase, at 75069 to 76780 8398

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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73,108 - 8396 mRNA_28 0.19 0.5
73,204 + 8396 mRNA_28 0.29 0.3
73,217 + 8396 mRNA_28 0.30 1.9
73,300 + 8396 mRNA_28 0.38 0.4
73,401 - 8396 mRNA_28 0.48 -0.3
73,569 - 8396 mRNA_28 0.65 -0.1
73,849 + -0.5
73,998 - 0.3
74,006 - -0.3
74,251 - 8397 mRNA_29 0.21 1.1
74,281 + 8397 mRNA_29 0.26 0.2
74,285 - 8397 mRNA_29 0.26 0.3
74,296 + 8397 mRNA_29 0.28 -1.1
74,309 + 8397 mRNA_29 0.29 0.7
74,320 - 8397 mRNA_29 0.31 -0.4
74,326 + 8397 mRNA_29 0.32 0.3
74,586 + 8397 mRNA_29 0.68 0.0
74,735 - 8397 mRNA_29 0.88 -0.7
74,756 + -0.1
75,229 - -0.1
75,360 - 8398 mRNA_30 0.17 -1.5
75,482 - 8398 mRNA_30 0.24 0.0