Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8472

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8471: 16839 - Hypothetical Protein, at 1308779 to 1309608 16839 mRNA_8472: 16840 - KOG1769 Ubiquitin-like proteins, at 1310090 to 1310770 16840 mRNA_8473: 16841 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 1310898 to 1312321 16841

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,309,096 - 16839 mRNA_8471 0.38 -0.1
1,309,108 - 16839 mRNA_8471 0.40 1.0
1,309,377 - 16839 mRNA_8471 0.72 -0.0
1,309,507 - 16839 mRNA_8471 0.88 -0.4
1,309,545 + -1.6
1,309,666 + 0.3
1,309,756 + 1.3
1,310,136 + -0.1
1,310,383 - 16840 mRNA_8472 0.43 0.0
1,310,397 + 16840 mRNA_8472 0.45 -0.8
1,310,401 + 16840 mRNA_8472 0.46 -0.0
1,310,706 - -0.1
1,310,791 - 0.3
1,310,807 - 1.5
1,310,809 - 0.6
1,310,824 + -0.3
1,310,827 - 0.4
1,310,827 - -0.0
1,310,831 + 0.4
1,310,834 - -0.1
1,310,867 + 0.2
1,310,968 - 0.9
1,310,992 - 0.5
1,310,997 + 0.1
1,311,012 + 1.2
1,311,017 + 0.2
1,311,112 + 16841 mRNA_8473 0.15 0.7
1,311,125 - 16841 mRNA_8473 0.16 0.1
1,311,140 - 16841 mRNA_8473 0.17 0.6
1,311,149 + 16841 mRNA_8473 0.18 0.9
1,311,154 - 16841 mRNA_8473 0.18 0.1
1,311,157 - 16841 mRNA_8473 0.18 0.1
1,311,311 + 16841 mRNA_8473 0.29 0.6
1,311,382 + 16841 mRNA_8473 0.34 -0.1
1,311,404 + 16841 mRNA_8473 0.36 1.4
1,311,443 - 16841 mRNA_8473 0.38 1.8
1,311,601 + 16841 mRNA_8473 0.49 0.7
1,311,731 - 16841 mRNA_8473 0.58 -1.4