Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8456

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8455: 16823 - K06013 STE24 STE24 endopeptidase, at 1274960 to 1276666 16823 mRNA_8456: 16824 - Hypothetical Protein, at 1276790 to 1279771 16824

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,275,929 - 16823 mRNA_8455 0.57 -1.0
1,275,934 - 16823 mRNA_8455 0.57 0.2
1,276,043 + 16823 mRNA_8455 0.63 -0.4
1,276,067 - 16823 mRNA_8455 0.65 -0.2
1,276,080 + 16823 mRNA_8455 0.66 -0.5
1,276,363 + 16823 mRNA_8455 0.82 0.7
1,276,504 - -0.8
1,276,537 + -0.4
1,276,557 + 0.0
1,276,634 - -0.7
1,276,734 + -0.7
1,276,754 - 0.0
1,276,819 - 0.6
1,276,884 + 0.5
1,277,057 + 0.0
1,277,556 - 16824 mRNA_8456 0.26 -0.3
1,277,829 + 16824 mRNA_8456 0.35 0.3
1,277,995 + 16824 mRNA_8456 0.40 0.6
1,278,193 + 16824 mRNA_8456 0.47 -0.2
1,278,219 + 16824 mRNA_8456 0.48 0.5
1,278,268 + 16824 mRNA_8456 0.50 0.5
1,278,299 + 16824 mRNA_8456 0.51 2.2
1,278,405 - 16824 mRNA_8456 0.54 1.0
1,278,411 + 16824 mRNA_8456 0.54 1.3
1,278,465 + 16824 mRNA_8456 0.56 0.6
1,278,623 - 16824 mRNA_8456 0.61 0.5
1,278,627 - 16824 mRNA_8456 0.62 -0.5
1,278,712 - 16824 mRNA_8456 0.64 -0.3
1,278,751 - 16824 mRNA_8456 0.66 2.4
1,278,806 + 16824 mRNA_8456 0.68 2.0
1,279,075 + 16824 mRNA_8456 0.77 0.0
1,279,236 + 16824 mRNA_8456 0.82 0.1
1,279,246 + 16824 mRNA_8456 0.82 0.2
1,279,248 - 16824 mRNA_8456 0.82 -0.2
1,279,249 + 16824 mRNA_8456 0.82 0.0
1,279,423 + 16824 mRNA_8456 0.88 -0.0
1,279,456 - 16824 mRNA_8456 0.89 0.8
1,279,489 - -0.1
1,279,495 + 0.3
1,279,584 - 0.3
1,279,826 - -0.7
1,279,854 + 2.4
1,279,872 - 0.4
1,279,946 + 0.6
1,279,989 - 0.3
1,279,998 - 1.1
1,280,005 + 0.6
1,280,007 + 0.0
1,280,018 + 0.6
1,280,019 + 0.2
1,280,029 - 0.4
1,280,042 + 0.3
1,280,045 - -0.4
1,280,254 - -0.2
1,280,346 + 0.3
1,280,414 - 0.9
1,280,443 - -0.0
1,280,494 + 0.1
1,280,501 + 0.2
1,280,562 + 2.0
1,280,563 - -1.1
1,280,759 - 0.2
1,280,760 + -0.1