Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8419

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8418: 16786 - HMMPfam-Cgr1 family-PF03879, at 1174029 to 1174652 16786 mRNA_8419: 16787 - K14310 NUP205, NUP192 nuclear pore complex protein Nup205, at 1175387 to 1181685 16787 mRNA_8420: 16788 - SUPERFAMILY--SSF52047, at 1181811 to 1183583 16788

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,174,816 + 0.5
1,174,869 + 1.8
1,174,881 - 2.8
1,174,924 - -0.6
1,175,018 - -0.9
1,175,034 + 0.6
1,175,786 - -0.9
1,180,070 + 16787 mRNA_8419 0.74 0.8
1,182,043 + 16788 mRNA_8420 0.13 -0.3
1,182,054 + 16788 mRNA_8420 0.14 1.0
1,182,077 - 16788 mRNA_8420 0.15 0.1
1,182,155 - 16788 mRNA_8420 0.19 0.2
1,182,218 - 16788 mRNA_8420 0.23 -1.5
1,182,371 + 16788 mRNA_8420 0.32 0.4
1,182,562 - 16788 mRNA_8420 0.42 -0.7
1,182,607 + 16788 mRNA_8420 0.45 0.2
1,182,630 - 16788 mRNA_8420 0.46 -0.9