Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8408

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8407: 16775 - K18914 FDXR adrenodoxin-NADP+ reductase, at 1144436 to 1146110 16775 mRNA_8408: 16776 - Hypothetical Protein, at 1146400 to 1148528 16776 mRNA_8409: 16777 - K09667 OGT protein O-GlcNAc transferase, at 1148634 to 1155172 16777

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,146,489 + 0.0
1,146,567 + -0.2
1,146,604 + 1.1
1,146,629 + 16776 mRNA_8408 0.11 -0.2
1,146,656 - 16776 mRNA_8408 0.12 0.0
1,146,659 + 16776 mRNA_8408 0.12 0.7
1,146,855 + 16776 mRNA_8408 0.21 0.2
1,147,016 + 16776 mRNA_8408 0.29 -0.2
1,147,017 + 16776 mRNA_8408 0.29 -0.4
1,147,059 + 16776 mRNA_8408 0.31 -0.5
1,147,285 + 16776 mRNA_8408 0.42 1.1
1,147,300 - 16776 mRNA_8408 0.42 0.5
1,147,325 - 16776 mRNA_8408 0.43 -0.0
1,147,342 - 16776 mRNA_8408 0.44 0.5
1,147,643 - 16776 mRNA_8408 0.58 0.1
1,147,653 + 16776 mRNA_8408 0.59 0.6
1,147,671 - 16776 mRNA_8408 0.60 -0.0
1,147,762 - 16776 mRNA_8408 0.64 -0.1
1,147,773 - 16776 mRNA_8408 0.64 0.3
1,147,817 + 16776 mRNA_8408 0.67 -1.6
1,147,862 + 16776 mRNA_8408 0.69 -0.4
1,148,253 - 16776 mRNA_8408 0.87 0.2
1,148,254 - 16776 mRNA_8408 0.87 0.9
1,148,331 + 0.0
1,148,334 - 0.8
1,148,334 + -0.4
1,148,406 - 0.1
1,148,428 + -0.7
1,148,567 - 0.7
1,148,574 + 0.6
1,148,836 + 0.8
1,149,001 - 2.3
1,149,275 - -0.4
1,149,392 + 16777 mRNA_8409 0.12 -0.5
1,149,440 - 16777 mRNA_8409 0.12 0.7
1,149,466 + 16777 mRNA_8409 0.13 0.2
1,149,504 - 16777 mRNA_8409 0.13 0.2