Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8353

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8352: 16720 - Hypothetical Protein, at 1012980 to 1013679 16720 mRNA_8353: 16721 - BLAST Clampless protein 1 [Leucoagaricus sp. SymC.cos], at 1014385 to 1015330 16721 mRNA_8354: 16722 - K07734 paiB transcriptional regulator, at 1015400 to 1016161 16722

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,013,498 + 16720 mRNA_8352 0.74 2.2
1,013,500 - 16720 mRNA_8352 0.74 0.8
1,013,502 + 16720 mRNA_8352 0.75 0.8
1,013,581 + 16720 mRNA_8352 0.86 1.2
1,013,967 - 1.3
1,013,985 - 0.0
1,014,108 + 0.4
1,014,113 - -0.3
1,014,116 + 0.6
1,014,126 - 0.5
1,014,129 + 0.3
1,014,234 + 1.5
1,014,303 - 0.3
1,014,837 + 16721 mRNA_8353 0.48 0.3
1,014,887 - 16721 mRNA_8353 0.53 1.6
1,014,975 - 16721 mRNA_8353 0.62 1.4
1,015,090 - 16721 mRNA_8353 0.75 1.1
1,015,397 - 0.4
1,015,428 - 1.0
1,015,755 + 16722 mRNA_8354 0.47 0.7
1,015,919 + 16722 mRNA_8354 0.68 0.5
1,016,043 + 16722 mRNA_8354 0.84 0.2
1,016,060 + 16722 mRNA_8354 0.87 0.4
1,016,176 - -0.2
1,016,195 - -0.7
1,016,283 - 1.1