Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8333

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8332: 16700 - K10082 LMAN2, VIP36 lectin, mannose-binding 2, at 956796 to 958192 16700 mRNA_8333: 16701 - SUPERFAMILY--SSF55781, at 958557 to 960459 16701 mRNA_8334: 16702 - BLAST mtf1_muccl ame full transcription factor mtf1 [Licht..., at 961362 to 964238 16702

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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957,654 - 16700 mRNA_8332 0.61 0.2
957,795 - 16700 mRNA_8332 0.72 0.4
957,912 + 16700 mRNA_8332 0.80 1.2
957,915 - 16700 mRNA_8332 0.80 1.4
958,060 - 0.6
958,061 + -0.1
958,066 - -0.6
958,087 + 0.1
958,147 - 0.2
958,230 + 0.0
958,231 - 0.3
958,359 - 0.6
958,384 - 0.1
958,385 + 0.1
958,485 - 1.6
958,669 - 0.6
958,670 + 0.2
958,833 + 16701 mRNA_8333 0.15 0.4
959,139 - 16701 mRNA_8333 0.31 -0.4
959,263 + 16701 mRNA_8333 0.37 0.3
960,148 + 16701 mRNA_8333 0.84 0.4
960,155 - 16701 mRNA_8333 0.84 -0.2
960,270 - 0.5
960,446 + -0.3
960,569 - 0.4
960,577 + -1.7
960,597 - 0.6
960,611 - -0.2
960,616 + -0.9
960,706 + 0.4
960,753 + 0.1
960,755 + -0.0
960,757 + 0.4
960,767 - 0.4
960,767 + 0.3
960,768 + 0.8
960,774 + 0.4
960,774 + 0.9
960,775 + 1.4
960,777 - 0.4
960,780 + 0.3
960,784 - -0.0
960,784 - -0.3
960,785 + 1.0
960,785 + 0.6
960,787 - 0.0
960,795 - 0.2
960,796 + 0.3
960,797 - 1.6
960,801 + 0.1
960,802 + 0.6
960,805 + 0.9
960,805 + -0.3
960,810 + 0.5
960,811 - 0.5
960,813 - 1.6
960,822 + 0.2
960,825 + 1.2
960,834 - 1.2
960,836 + 0.7
960,847 + 0.9
960,852 - 0.2
960,861 - 0.1
960,868 - -1.0
960,870 - 0.8
960,872 - 0.3
960,873 - 0.2
960,887 + 1.3
960,919 - 0.4
960,922 + 0.0
960,925 - -0.0
960,927 - -0.0
960,930 + 0.4
960,933 + -1.2
960,935 - 0.2
960,938 - -0.8
960,939 + 0.2
960,948 + 0.7
960,949 + 2.0
960,952 - 1.3
960,952 - 0.8
960,953 + -0.7
960,955 + 0.5
960,955 - -0.3
960,957 + 0.3
960,989 + 0.2
960,999 + 0.0
961,027 + 0.8
961,042 - 0.4
961,064 - 0.3
961,211 + -0.1
961,257 - -0.3
961,333 - 0.5