Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8255

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776228 to 777333 16622 mRNA_8255: 16623 - K01792 E5.1.3.15 glucose-6-phosphate 1-epimerase, at 777687 to 778914 16623 mRNA_8256: 16624 - K11324 DMAP1, SWC4, EAF2 DNA methyltransferase 1-associated protein 1, at 779592 to 781358 16624

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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776,801 + 16622 mRNA_8254 0.52 -0.0
777,072 + 16622 mRNA_8254 0.76 0.6
777,189 + 16622 mRNA_8254 0.87 0.2
777,630 + -1.0
778,356 + 16623 mRNA_8255 0.54 0.4
778,362 + 16623 mRNA_8255 0.55 0.7
778,550 + 16623 mRNA_8255 0.70 0.6
778,821 + 1.1
778,836 - 0.3
778,937 - 0.6
778,949 + 0.7
778,963 - 1.5
778,963 - 0.6
778,972 + 2.1
778,975 + -0.5
779,008 + 0.7
779,123 - 1.2
779,139 + 0.9
779,256 - -1.9
779,409 - 0.4