Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8215

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8214: 16582 - BLAST NADH-ubiquinone oxidoreductase 9.5 kDa subunit [R..., at 683320 to 684168 16582 mRNA_8215: 16583 - ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 684650 to 685960 16583 mRNA_8216: 16584 - K14376 PAP poly(A) polymerase, at 686292 to 689011 16584

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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683,977 + 16582 mRNA_8214 0.77 0.2
684,101 + 0.2
684,114 - -0.4
684,135 - -0.1
684,262 + 0.3
684,297 + 1.9
684,419 + -1.7
684,434 - 0.5
684,715 + 0.7
684,962 + 16583 mRNA_8215 0.24 -0.6
685,131 - 16583 mRNA_8215 0.37 -0.5
685,264 - 16583 mRNA_8215 0.47 1.1
685,424 + 16583 mRNA_8215 0.59 0.6
685,711 + 16583 mRNA_8215 0.81 0.2
685,712 - 16583 mRNA_8215 0.81 0.6
685,712 + 16583 mRNA_8215 0.81 0.0
685,712 - 16583 mRNA_8215 0.81 -0.5
685,854 - -1.4
685,996 + 0.7
686,002 + 2.0
686,014 + 0.4
686,018 - 0.3
686,039 + 0.5
686,162 - 0.6
686,341 + 0.5
686,757 + 16584 mRNA_8216 0.17 0.5
686,893 + 16584 mRNA_8216 0.22 1.6