Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8206

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8205: 16573 - K11339 MORF4L1, MRG15, EAF3 mortality factor 4-like protein 1, at 667088 to 668435 16573 mRNA_8206: 16574 - Hypothetical Protein, at 668927 to 671971 16574 mRNA_8207: 16575 - K09578 PIN1 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, at 672113 to 672814 16575

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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668,207 + 16573 mRNA_8205 0.83 -0.1
668,511 + 2.1
668,655 + 1.0
668,663 + 0.6
668,672 - 0.8
668,673 - -0.1
668,678 - -0.1
668,684 - 0.6
668,805 - 0.1
669,249 + 16574 mRNA_8206 0.11 0.3
669,258 - 16574 mRNA_8206 0.11 0.2
669,806 - 16574 mRNA_8206 0.29 -0.6
670,325 - 16574 mRNA_8206 0.46 1.5
670,340 + 16574 mRNA_8206 0.46 0.3
670,884 - 16574 mRNA_8206 0.64 0.2
671,177 + 16574 mRNA_8206 0.74 0.1
671,347 - 16574 mRNA_8206 0.79 -0.6
671,608 - 16574 mRNA_8206 0.88 -0.8
671,919 + 0.7
672,042 + 0.7
672,056 - 0.8
672,202 - 16575 mRNA_8207 0.13 -0.4
672,216 + 16575 mRNA_8207 0.15 1.4
672,322 + 16575 mRNA_8207 0.30 0.3
672,341 - 16575 mRNA_8207 0.32 -0.2
672,374 + 16575 mRNA_8207 0.37 1.1
672,682 + 16575 mRNA_8207 0.81 0.1