Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8195

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8194: 16562 - K20794 NAA40, NAT4 N-alpha-acetyltransferase 40, at 644404 to 645092 16562 mRNA_8195: 16563 - Hypothetical Protein, at 645580 to 648404 16563 mRNA_8196: 16564 - K13501 TRP1 anthranilate synthase / indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase, at 648515 to 650860 16564

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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644,628 - 16562 mRNA_8194 0.33 -0.1
644,650 + 16562 mRNA_8194 0.36 0.3
644,809 + 16562 mRNA_8194 0.59 1.4
645,368 + 0.3
645,384 - -0.1
645,384 - 0.7
645,419 + 0.2
645,538 + 0.8
645,541 + 0.3
645,550 - 0.7
646,267 + 16563 mRNA_8195 0.24 -0.2
646,406 - 16563 mRNA_8195 0.29 0.0
646,417 + 16563 mRNA_8195 0.30 0.4
647,442 + 16563 mRNA_8195 0.66 0.3
647,543 - 16563 mRNA_8195 0.69 -0.1
648,230 - -0.0