Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8164

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8163: 16531 - HMMPfam-Domain of unknown function (DUF4505)-PF14956, at 563626 to 564400 16531 mRNA_8164: 16532 - Hypothetical Protein, at 564616 to 567626 16532

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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563,979 + 16531 mRNA_8163 0.46 0.8
564,106 - 16531 mRNA_8163 0.62 0.8
564,110 + 16531 mRNA_8163 0.62 0.6
564,212 - 16531 mRNA_8163 0.76 0.3
564,222 - 16531 mRNA_8163 0.77 -0.4
564,234 - 16531 mRNA_8163 0.78 0.2
564,410 + 1.0
564,431 - 0.0
564,435 + 0.3
564,576 - 1.3
564,586 + 0.8
564,688 - 0.3
564,858 + 1.5
564,972 - 16532 mRNA_8164 0.12 0.4
565,035 + 16532 mRNA_8164 0.14 -0.1
565,147 + 16532 mRNA_8164 0.18 0.7
565,150 - 16532 mRNA_8164 0.18 0.0
565,175 + 16532 mRNA_8164 0.19 -1.2
565,409 - 16532 mRNA_8164 0.26 -0.1
565,603 + 16532 mRNA_8164 0.33 0.2
565,816 + 16532 mRNA_8164 0.40 1.2
566,976 - 16532 mRNA_8164 0.78 0.0
566,991 + 16532 mRNA_8164 0.79 0.7
567,036 - 16532 mRNA_8164 0.80 0.8
567,237 - 16532 mRNA_8164 0.87 0.9
567,261 - 16532 mRNA_8164 0.88 0.1
567,392 + 0.5
567,409 - 0.2
567,750 + -0.1
567,761 + 1.6
567,930 - 0.7
567,980 + 0.9
568,369 + 1.5
568,419 - -0.9
568,583 - 0.2