Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8093

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8092: 16460 - K14457 MOGAT2, MGAT2 2-acylglycerol O-acyltransferase 2, at 399883 to 401738 16460 mRNA_8093: 16461 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 402120 to 403069 16461 mRNA_8094: 16462 - K10775 PAL phenylalanine ammonia-lyase, at 403260 to 405803 16462

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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401,282 - 16460 mRNA_8092 0.75 1.2
401,285 - 16460 mRNA_8092 0.76 0.0
401,701 + 0.8
401,713 + 0.2
401,837 + 0.4
401,843 - 0.4
401,931 - -0.4
401,967 + 0.6
401,976 + 3.0
401,985 + -0.2
401,996 + 0.5
402,008 + -0.3
402,023 - 1.2
402,029 + 0.0
402,163 + 1.4
402,192 - 0.4
402,200 - 0.5
402,312 - 16461 mRNA_8093 0.20 0.4
402,367 - 16461 mRNA_8093 0.26 0.7
402,448 - 16461 mRNA_8093 0.35 -0.1
402,596 - 16461 mRNA_8093 0.50 0.5
402,763 - 16461 mRNA_8093 0.68 0.8
402,810 + 16461 mRNA_8093 0.73 0.3
403,041 + -0.3
403,075 + 0.7
403,131 - -0.5
403,188 - -0.3
403,237 - -1.6
403,278 + -0.5
403,305 - -1.1
403,667 + 16462 mRNA_8094 0.16 0.5