Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8020

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8019: 16387 - Hypothetical Protein, at 222905 to 224449 16387 mRNA_8020: 16388 - K19841 STE50 protein STE50, at 224633 to 227369 16388 mRNA_8021: 16389 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905, at 227452 to 229516 16389

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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223,681 + 16387 mRNA_8019 0.50 1.1
223,949 + 16387 mRNA_8019 0.68 -0.1
224,244 - 16387 mRNA_8019 0.87 0.2
224,337 + -1.6
224,411 - 0.4
224,448 - 0.1
224,617 - 0.7
224,949 + 16388 mRNA_8020 0.12 0.9
225,429 - 16388 mRNA_8020 0.29 1.0
226,756 - 16388 mRNA_8020 0.78 2.7
226,785 + 16388 mRNA_8020 0.79 1.6
226,926 - 16388 mRNA_8020 0.84 0.1
227,166 + 0.3
227,373 - 0.6
227,374 - -0.3
227,393 - 1.6
227,808 - 16389 mRNA_8021 0.17 -0.2
227,818 - 16389 mRNA_8021 0.18 0.7
227,929 - 16389 mRNA_8021 0.23 0.0
228,336 + 16389 mRNA_8021 0.43 0.2