Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7980

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7979: 16347 - KOG0504 FOG Ankyrin repeat, at 137884 to 138763 16347 mRNA_7980: 16348 - KOG0550 Molecular chaperone (DnaJ superfamily), at 138998 to 141142 16348 mRNA_7981: 16349 - KOG2504 Monocarboxylate transporter, at 141526 to 143466 16349

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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138,045 + 16347 mRNA_7979 0.18 0.9
138,870 + 0.6
138,979 - 0.4
139,086 - 1.1
139,127 - 0.5
139,266 - 16348 mRNA_7980 0.12 1.4
139,905 - 16348 mRNA_7980 0.42 0.1
139,964 - 16348 mRNA_7980 0.45 0.5
140,239 - 16348 mRNA_7980 0.58 0.5
140,241 + 16348 mRNA_7980 0.58 0.9
140,257 - 16348 mRNA_7980 0.59 0.4
140,286 - 16348 mRNA_7980 0.60 0.6
140,292 + 16348 mRNA_7980 0.60 0.3
140,371 - 16348 mRNA_7980 0.64 -0.2
140,592 - 16348 mRNA_7980 0.74 0.2
141,086 + 0.6
141,097 + -0.3
141,338 + 0.1
141,415 + -0.9
141,462 + 0.2
141,470 + 0.7
141,616 + -0.6
141,792 - 16349 mRNA_7981 0.14 0.6
141,919 - 16349 mRNA_7981 0.20 -0.2