Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7908

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7907: 16275 - K14951 ATP13A3_4_5 cation-transporting ATPase 13A3/4/5, at 1348898 to 1356379 16275 mRNA_7908: 16276 - K03783 punA, PNP purine-nucleoside phosphorylase, at 1357021 to 1359036 16276 mRNA_7909: 16277 - Hypothetical Protein, at 1359172 to 1360020 16277

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,356,376 - 0.7
1,356,422 + 1.4
1,356,501 - -0.3
1,356,521 + 1.0
1,356,522 - 0.4
1,356,668 + 2.1
1,356,775 - 1.3
1,356,775 - 0.7
1,356,814 + -0.7
1,356,823 - 0.4
1,356,925 - -0.9
1,356,925 - -0.8
1,356,926 + -0.8
1,356,964 + 0.2
1,357,096 + 0.1
1,357,117 - 0.6
1,357,252 - 16276 mRNA_7908 0.11 0.4
1,357,257 - 16276 mRNA_7908 0.12 0.4
1,357,258 + 16276 mRNA_7908 0.12 -0.1
1,357,401 - 16276 mRNA_7908 0.19 0.5
1,357,404 - 16276 mRNA_7908 0.19 0.3
1,357,406 + 16276 mRNA_7908 0.19 2.0
1,357,414 + 16276 mRNA_7908 0.19 0.7
1,357,414 + 16276 mRNA_7908 0.19 0.9
1,357,589 + 16276 mRNA_7908 0.28 1.3
1,357,697 - 16276 mRNA_7908 0.34 -0.0
1,357,849 - 16276 mRNA_7908 0.41 0.1
1,357,887 - 16276 mRNA_7908 0.43 1.0
1,357,979 - 16276 mRNA_7908 0.48 0.9
1,358,022 + 16276 mRNA_7908 0.50 0.1
1,358,055 - 16276 mRNA_7908 0.51 -2.0
1,358,144 - 16276 mRNA_7908 0.56 -0.7
1,358,431 - 16276 mRNA_7908 0.70 -0.0
1,358,557 + 16276 mRNA_7908 0.76 1.7
1,358,560 - 16276 mRNA_7908 0.76 -0.9
1,358,560 - 16276 mRNA_7908 0.76 0.4
1,358,674 - 16276 mRNA_7908 0.82 -0.0
1,358,885 - -0.5
1,358,966 - 0.6
1,358,974 + -1.3
1,359,003 - 0.6
1,359,004 - 1.2
1,359,021 + 2.4
1,359,117 - 1.9
1,359,181 + -0.3
1,359,329 + 16277 mRNA_7909 0.18 0.3
1,359,439 - 16277 mRNA_7909 0.31 -0.5
1,359,474 - 16277 mRNA_7909 0.36 0.1
1,359,488 - 16277 mRNA_7909 0.37 0.2
1,359,599 - 16277 mRNA_7909 0.50 1.3
1,359,664 - 16277 mRNA_7909 0.58 1.7
1,359,733 - 16277 mRNA_7909 0.66 0.6
1,359,838 - 16277 mRNA_7909 0.78 0.5
1,359,845 - 16277 mRNA_7909 0.79 0.2
1,359,846 - 16277 mRNA_7909 0.79 1.7
1,359,879 - 16277 mRNA_7909 0.83 -0.4
1,359,879 - 16277 mRNA_7909 0.83 1.5
1,359,913 - 16277 mRNA_7909 0.87 0.2
1,360,033 + 0.7