Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7884

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7884: 16252 - KOG1911 Heterochromatin-associated protein HP1 and related CHROMO domain proteins, at 1296851 to 1297993 16252 mRNA_7885: 16253 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1298396 to 1300627 16253

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,295,980 + 0.8
1,295,987 - -0.2
1,296,137 - 0.0
1,296,391 - 0.5
1,296,865 + 0.0
1,296,867 + 0.1
1,297,076 - 16252 mRNA_7884 0.20 -0.5
1,297,083 + 16252 mRNA_7884 0.20 -0.5
1,297,572 + 16252 mRNA_7884 0.63 1.1
1,297,589 + 16252 mRNA_7884 0.65 -1.4
1,297,866 - 16252 mRNA_7884 0.89 -1.5
1,297,875 + 16252 mRNA_7884 0.90 1.3
1,298,024 - 1.2
1,298,045 - -0.5
1,298,045 - -0.2
1,298,060 + 0.1
1,298,067 + 0.2
1,298,176 + 0.7
1,298,190 + 2.6
1,298,211 + 0.8
1,298,214 - -0.5
1,298,270 - -0.1
1,298,299 - -0.6
1,298,306 + 0.6
1,298,309 + 0.1
1,298,317 - 1.2
1,298,317 - 0.7
1,298,318 - 1.6
1,298,319 - 0.5
1,298,321 - 0.3
1,298,325 + 0.7
1,298,430 - 0.3
1,298,626 - 16253 mRNA_7885 0.10 -0.1
1,298,634 + 16253 mRNA_7885 0.11 0.2
1,298,634 + 16253 mRNA_7885 0.11 0.3
1,298,676 + 16253 mRNA_7885 0.13 0.2
1,298,934 + 16253 mRNA_7885 0.24 2.4