Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7794

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7793: 16161 - KOG2533 Permease of the major facilitator superfamily, at 1079751 to 1082050 16161 mRNA_7794: 16162 - BLAST rRNA (adenine-N6,N6)-dimethyltransferase [Rhizoctonia..., at 1082300 to 1083358 16162 mRNA_7795: 16163 - ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006, at 1084196 to 1085821 16163

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,081,346 + 16161 mRNA_7793 0.69 0.0
1,081,622 + 16161 mRNA_7793 0.81 -0.2
1,081,854 - -0.1
1,082,055 + 1.3
1,082,305 - 1.6
1,082,476 + 16162 mRNA_7794 0.17 -1.3
1,082,732 - 16162 mRNA_7794 0.41 0.7
1,082,732 + 16162 mRNA_7794 0.41 0.3
1,082,894 + 16162 mRNA_7794 0.56 -0.1
1,082,925 + 16162 mRNA_7794 0.59 -0.3
1,082,930 - 16162 mRNA_7794 0.59 0.3
1,082,931 + 16162 mRNA_7794 0.60 1.4
1,082,932 - 16162 mRNA_7794 0.60 1.0
1,082,949 - 16162 mRNA_7794 0.61 0.1
1,082,956 - 16162 mRNA_7794 0.62 0.5
1,082,957 + 16162 mRNA_7794 0.62 1.2
1,083,044 - 16162 mRNA_7794 0.70 0.5
1,083,045 - 16162 mRNA_7794 0.70 -0.1
1,083,087 - 16162 mRNA_7794 0.74 0.5
1,083,230 - 16162 mRNA_7794 0.88 0.1
1,083,246 + 16162 mRNA_7794 0.89 -0.4
1,083,340 - 0.2
1,083,361 - 0.4
1,083,362 - 0.1
1,083,509 + -0.3
1,083,527 + 0.6
1,083,531 + 1.5
1,083,535 + 0.3
1,083,551 - 0.3
1,083,561 - -0.4
1,083,599 + 0.7
1,083,624 - -0.7
1,083,745 - 1.3
1,083,755 - 0.5
1,083,758 - -0.0
1,083,795 + -0.1
1,083,897 - 0.2
1,083,909 - 0.1
1,084,017 + -0.2
1,084,022 - 0.8