Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7738

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7737: 16105 - HMMPfam-Antibiotic biosynthesis monooxygenase-PF03992,SUPERFAMILY--SSF54909, at 959514 to 960315 16105 mRNA_7738: 16106 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 960464 to 961733 16106 mRNA_7739: 16107 - K20476 RIC1 RAB6A-GEF complex partner protein 1, at 962010 to 966625 16107

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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959,472 - 0.6
959,646 - 16105 mRNA_7737 0.16 0.9
959,726 - 16105 mRNA_7737 0.26 1.0
959,874 + 16105 mRNA_7737 0.45 1.1
961,150 + 16106 mRNA_7738 0.54 1.2
961,157 - 16106 mRNA_7738 0.55 0.6
961,215 + 16106 mRNA_7738 0.59 0.9
961,584 + 16106 mRNA_7738 0.88 0.6
961,649 - 0.2
961,655 + 0.8
961,658 - -0.3
961,912 + 0.7
962,030 - 0.9
962,620 - 16107 mRNA_7739 0.13 0.9