Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7689

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7688: 16056 - Hypothetical Protein, at 840776 to 844586 16056 mRNA_7689: 16057 - BLAST triacylglycerol lipase [Pochonia chlamydosporia 170], at 844796 to 845727 16057 mRNA_7690: 16058 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 846247 to 848747 16058

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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843,801 - 16056 mRNA_7688 0.79 0.1
843,878 + 16056 mRNA_7688 0.81 -0.5
843,993 + 16056 mRNA_7688 0.84 1.3
844,075 - 16056 mRNA_7688 0.87 0.1
844,197 - 16056 mRNA_7688 0.90 -0.7
844,237 - 1.7
844,516 + 0.4
844,521 - 0.8
844,585 + -0.4
844,592 - -0.1
844,713 - -0.1
845,021 + 16057 mRNA_7689 0.24 0.5
845,154 + 16057 mRNA_7689 0.38 0.8
845,157 - 16057 mRNA_7689 0.39 0.2
845,281 + 16057 mRNA_7689 0.52 0.6
845,370 - 16057 mRNA_7689 0.62 1.3
845,373 - 16057 mRNA_7689 0.62 0.1
845,510 - 16057 mRNA_7689 0.77 1.3
845,586 + 16057 mRNA_7689 0.85 0.9
845,696 + -1.6
845,704 + 0.3
845,713 - 0.6
845,728 + -0.4
845,826 + -0.1
845,864 + -0.1
845,871 - 0.8
845,878 + -1.3
845,966 - 0.6
845,997 + 0.2
845,998 - 0.7
846,005 - 1.6
846,020 + 0.7
846,038 - 1.4
846,299 + 1.4
846,386 - 0.3
846,498 - 16058 mRNA_7690 0.10 -1.2
846,666 - 16058 mRNA_7690 0.17 0.8
846,677 + 16058 mRNA_7690 0.17 1.0