Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7663

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7662: 16030 - K13519 LPT1, ALE1 lysophospholipid acyltransferase, at 788706 to 790925 16030 mRNA_7663: 16031 - K03305 TC.POT proton-dependent oligopeptide transporter, POT family, at 791381 to 793587 16031

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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790,402 - 16030 mRNA_7662 0.76 0.8
790,975 - -1.2
790,988 - 0.4
790,990 + 0.4
790,993 - 0.9
790,995 - 0.1
791,015 - 1.0
791,036 + 1.1
791,092 - -1.0
791,131 - -0.5
791,133 + 0.8
791,151 + 0.5
791,156 + 1.8
791,193 - -0.8
791,199 - 1.4
791,212 + -1.3
791,286 + 2.0
791,290 - 1.0
791,295 + -0.1
791,295 + 0.1
791,312 + 0.6
791,315 - 0.2
791,335 - 1.1
791,339 - 0.9
791,431 + 0.2
791,444 + -1.6
791,446 + 0.7
791,447 - 0.3
791,475 + -0.3
791,760 + 16031 mRNA_7663 0.17 0.6
791,851 + 16031 mRNA_7663 0.21 1.6
791,990 - 16031 mRNA_7663 0.28 -1.5
792,109 + 16031 mRNA_7663 0.33 0.2
792,184 + 16031 mRNA_7663 0.36 -1.6
792,554 + 16031 mRNA_7663 0.53 1.4
792,903 - 16031 mRNA_7663 0.69 1.8
793,070 + 16031 mRNA_7663 0.77 1.6
793,071 - 16031 mRNA_7663 0.77 0.4
793,126 - 16031 mRNA_7663 0.79 0.4
793,222 + 16031 mRNA_7663 0.83 1.0
793,297 - 16031 mRNA_7663 0.87 -0.2
793,402 - 0.8
793,452 + 0.8
793,610 + -0.2
793,657 - -0.0
793,690 - 0.7
793,709 - -0.1
793,759 - 0.3
793,769 + 0.2
793,774 - -0.4
793,787 - -0.5
793,795 - 0.7
793,832 + 0.3
793,917 + 0.5
793,919 - -0.2
793,929 + -1.2
793,930 - -1.0
793,936 + -0.9
793,936 - 0.4
793,939 + 1.0
793,940 + 1.0
793,941 + 0.3
793,941 + 0.8
793,948 - -0.3
793,955 - -0.5
793,957 - 1.2
793,960 + 0.5
793,963 - 0.4
793,968 - 0.2
793,977 - -0.1
793,994 + 0.2
794,005 + 0.8
794,006 - 0.9
794,008 - -1.1
794,009 + -0.8
794,034 + 0.5
794,035 + 0.2
794,037 + -0.1
794,053 + -0.4
794,058 + 0.1
794,071 - 0.5
794,074 + 0.1
794,077 - 1.0
794,078 + 0.3
794,081 + -0.2
794,082 + 0.2
794,093 - 0.1
794,096 - 0.7
794,098 - 0.2
794,104 + -0.5
794,105 - -0.0
794,115 + 0.5
794,117 + 0.4
794,122 - -0.0
794,122 - 0.1
794,123 - 0.2
794,127 - -0.3
794,130 + 0.0
794,134 + 0.2
794,135 - 1.3
794,136 - 1.1
794,138 + 0.2
794,141 + -0.3
794,152 - 0.7
794,155 + 1.0
794,161 + 0.4
794,162 - 0.8
794,164 - -0.0
794,164 - -0.7
794,165 - -0.2
794,167 - 0.3
794,168 + 0.1
794,174 + -0.2
794,175 + 0.6
794,177 - -0.1
794,177 + 1.3
794,179 - 0.4
794,180 - -0.2
794,180 - 0.3
794,182 + 0.2
794,184 + -0.1
794,185 + 0.4
794,185 - -0.5
794,186 + 0.5
794,187 - -0.5
794,187 - 1.8
794,202 - 0.3
794,203 + 1.4
794,203 + 0.2
794,203 - 0.7
794,204 + 0.7
794,206 + -0.7
794,209 + 1.3
794,210 - -0.4
794,223 - -0.3
794,227 - 0.5
794,227 + -0.4
794,229 + 0.0
794,230 - -0.1
794,233 + 0.2
794,233 - -0.0
794,236 - -0.4
794,237 + 0.3
794,238 + 0.2
794,240 - 0.1
794,245 - 0.9
794,245 - 0.8
794,248 + 0.6
794,248 - -0.5
794,252 - 0.8
794,253 - 0.2
794,259 - 0.8
794,259 + -0.6
794,261 + 1.0
794,262 + -0.2
794,265 + 1.0
794,267 - 0.0
794,278 - 0.1
794,281 - 0.6
794,283 + 0.8
794,292 + -0.0
794,372 + 1.0
794,396 + -0.2
794,418 + 0.2
794,422 + -0.2
794,427 + 0.3
794,447 + 1.5
794,453 - -0.9
794,459 + 0.4
794,496 - -0.6
794,517 - 1.0
794,521 - -0.7
794,525 + 0.5
794,529 + 0.9
794,542 - 0.8
794,555 + 0.3
794,556 + 0.2
794,558 + 0.3
794,561 - 0.8
794,563 + 0.1
794,568 + 0.1
794,575 + 0.3
794,576 - 0.8
794,578 - 0.6