Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7610

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7609: 15977 - KOG3239 Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1), at 667919 to 668964 15977 mRNA_7610: 15978 - KOG0548 Molecular co-chaperone STI1, at 669318 to 671371 15978 mRNA_7611: 15979 - KOG4779 Predicted membrane protein, at 671733 to 672150 15979

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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668,433 - 15977 mRNA_7609 0.49 -0.9
668,859 + 15977 mRNA_7609 0.90 -0.1
668,982 + -0.7
668,989 + 0.7
668,995 - 0.8
669,007 + 0.0
669,018 + 0.6
669,153 + -0.1
669,154 + 0.1
669,159 - -0.1
669,583 - 15978 mRNA_7610 0.13 -0.2
669,592 + 15978 mRNA_7610 0.13 0.4
669,872 + 15978 mRNA_7610 0.27 0.6
670,092 + 15978 mRNA_7610 0.38 -1.1
670,307 - 15978 mRNA_7610 0.48 2.7
670,443 + 15978 mRNA_7610 0.55 -0.1
670,451 + 15978 mRNA_7610 0.55 0.3
672,336 + 0.0
672,338 + -0.5
672,342 + 0.3