Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7467

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7466: 15834 - K17887 SNX25, MDM1 sorting nexin-25, at 345181 to 349645 15834 mRNA_7467: 15835 - Hypothetical Protein, at 349793 to 351109 15835 mRNA_7468: 15836 - Hypothetical Protein, at 351460 to 352308 15836

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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349,006 + 15834 mRNA_7466 0.86 -1.4
349,279 + 0.1
349,279 + 2.1
349,293 + 0.4
349,391 + 0.5
349,409 + 0.1
349,439 - 0.2
349,449 + 1.6
349,569 - -0.2
349,571 - 1.3
349,579 - 0.2
349,579 - 0.2
349,582 - -1.8
349,725 + 1.0
349,744 + 1.4
349,749 + -0.8
349,904 - -0.5
350,015 - 15835 mRNA_7467 0.17 -0.1
350,022 - 15835 mRNA_7467 0.17 -0.2
350,027 + 15835 mRNA_7467 0.18 2.1
350,136 + 15835 mRNA_7467 0.26 0.2
350,315 - 15835 mRNA_7467 0.40 0.8
350,320 + 15835 mRNA_7467 0.40 0.8
350,324 - 15835 mRNA_7467 0.40 0.6
350,337 - 15835 mRNA_7467 0.41 -0.0
350,486 - 15835 mRNA_7467 0.53 1.9
350,587 - 15835 mRNA_7467 0.60 -0.0
350,617 + 15835 mRNA_7467 0.63 -1.2
350,778 - 15835 mRNA_7467 0.75 0.6
351,054 + 1.3
351,104 + 0.4
351,199 - 1.2
351,211 + -0.3
351,327 - 1.2
351,476 - 0.2
351,488 + 0.3
351,630 - 15836 mRNA_7468 0.20 0.6
351,736 + 15836 mRNA_7468 0.33 1.4
351,781 - 15836 mRNA_7468 0.38 -0.2
351,797 - 15836 mRNA_7468 0.40 0.8
351,913 + 15836 mRNA_7468 0.53 -0.7
352,028 - 15836 mRNA_7468 0.67 0.9