Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7455

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7454: 15822 - K01412 PMPCA, MAS2 mitochondrial-processing peptidase subunit alpha, at 312839 to 314664 15822 mRNA_7455: 15823 - KOG1740 Predicted mitochondrial/chloroplast ribosomal protein S17, at 315184 to 315974 15823 mRNA_7456: 15824 - Hypothetical Protein, at 316330 to 316788 15824

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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314,763 - 1.4
314,806 + -0.0
314,812 + 0.7
314,816 + 0.3
314,824 - 0.6
314,832 + -0.0
314,940 - 0.1
314,956 - 0.9
314,956 + -0.2
314,984 + -0.3
315,097 - 0.1
315,827 + 15823 mRNA_7455 0.81 1.0
315,848 + 15823 mRNA_7455 0.84 -1.2
315,980 + 0.6
316,268 + 0.2
316,398 + 15824 mRNA_7456 0.15 0.6
316,415 + 15824 mRNA_7456 0.19 0.4
316,555 + 15824 mRNA_7456 0.49 -0.7
316,560 - 15824 mRNA_7456 0.50 0.1
316,646 - 15824 mRNA_7456 0.69 0.3
316,685 - 15824 mRNA_7456 0.77 0.2
316,686 - 15824 mRNA_7456 0.78 -0.8
316,720 - 15824 mRNA_7456 0.85 -0.0
316,839 - 1.1
316,859 + -0.4
316,867 + 0.2
316,907 + 0.5
316,930 + 0.0
316,937 - 2.1
316,944 + 0.2
316,959 + 0.1