Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7438

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7437: 15805 - K01756 purB, ADSL adenylosuccinate lyase, at 276524 to 278511 15805 mRNA_7438: 15806 - K01455 E3.5.1.49 formamidase, at 278765 to 280421 15806 mRNA_7439: 15807 - K20989 DUR3 urea-proton symporter, at 281348 to 284451 15807

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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278,555 + -0.2
278,559 + 1.5
278,560 - -0.7
278,566 + 0.1
278,570 + 1.1
278,582 + -0.4
278,583 - 0.1
278,583 - 1.5
278,584 + 0.2
278,588 + 0.2
278,595 - 1.9
278,723 - -0.8
278,730 - 0.5
278,741 - 0.6
278,748 + 0.4
279,189 + 15806 mRNA_7438 0.26 0.1
279,767 + 15806 mRNA_7438 0.60 -0.3
279,910 - 15806 mRNA_7438 0.69 0.3
280,056 - 15806 mRNA_7438 0.78 0.6
280,344 - 0.4
280,496 + -0.1
280,520 - 0.8
280,526 + -0.1
280,526 + -0.3
280,548 - 1.0
280,548 - 0.1
280,644 - 1.1
280,654 - 0.4
280,655 - 0.3
280,662 + -0.3
280,677 + -0.2
280,798 + 0.8
280,812 + 0.6
280,815 - 1.4
280,824 - 0.8
280,827 - 0.3