Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7427

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7426: 15794 - Hypothetical Protein, at 246763 to 247720 15794 mRNA_7427: 15795 - SUPERFAMILY--SSF51197, at 248497 to 250090 15795

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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247,539 - 15794 mRNA_7426 0.81 1.5
247,622 + 15794 mRNA_7426 0.90 0.5
247,624 - 15794 mRNA_7426 0.90 0.4
247,635 - -0.4
247,635 - 0.4
247,638 - 0.5
247,649 - -1.1
247,653 + 0.5
247,714 - 0.3
247,724 - 0.8
247,727 - 1.1
247,738 - -0.5
247,739 - 0.4
247,749 + 0.4
247,750 - 0.4
247,750 + 0.9
247,753 + 0.1
247,756 + 0.3
247,757 + 1.7
247,762 - 0.2
247,766 - 0.6
247,767 + -1.0
247,781 + 0.5
247,792 - 0.6
247,793 + 1.3
247,794 + 0.0
247,796 + -0.0
247,799 - 1.2
247,800 + 0.3
247,826 - -0.9
247,833 + 0.9
247,846 + 0.2
247,860 + -0.9
247,865 + 1.8
247,866 - 0.5
247,871 + 0.3
247,884 + 0.1
247,885 - -0.1
247,887 + -0.7
247,888 - 0.7
247,889 - 0.5
247,892 + -0.3
247,892 - 0.6
247,895 + 0.0
247,898 - 1.1
247,919 + 0.8
247,925 + 0.0
247,925 + 0.8
247,927 + 0.0
247,935 + 1.3
247,935 - -1.6
247,935 + 0.2
247,936 - -0.3
247,936 - 0.7
247,965 + -0.0
247,982 - -0.5
247,995 + 0.1
247,996 - 1.0
248,053 - 1.1
248,055 + 0.2
248,059 - 0.0
248,065 - 0.7
248,067 + -0.3
248,072 + 0.0
248,081 - 0.0
248,082 - 1.1
248,083 - 0.6
248,086 + 1.0
248,087 - 0.6
248,128 + -0.0
248,151 - 0.3
248,173 - -0.1
248,187 - 0.2
248,193 - 0.1
248,198 + 0.2
248,210 + -2.1
248,221 - -0.4
248,232 + -0.2
248,346 + -0.4
248,393 - 1.2
248,798 + 15795 mRNA_7427 0.19 1.2
249,262 + 15795 mRNA_7427 0.48 -0.3
249,387 + 15795 mRNA_7427 0.56 -0.5
249,388 + 15795 mRNA_7427 0.56 1.1
249,413 - 15795 mRNA_7427 0.57 -0.0
249,536 - 15795 mRNA_7427 0.65 -1.5
249,708 + 15795 mRNA_7427 0.76 -1.1
249,973 + 0.1
250,117 - 0.4
250,193 + 0.2
250,239 - 0.2
250,361 + -1.6
250,414 + 0.3
250,504 - -0.1
250,528 - 1.1
250,587 + 1.1
250,694 + 0.5
250,710 + 2.0
250,745 - 0.6
250,782 + 0.3
250,806 - 0.8
250,838 + 0.9
250,838 - 0.4
250,854 + 0.9
250,957 - 0.2
250,958 - -0.2
250,963 + 0.3
250,964 + -0.1
250,973 + -0.6
250,983 + -0.7