Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7424

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7423: 15791 - K01568 PDC, pdc pyruvate decarboxylase, at 241820 to 244654 15791 mRNA_7424: 15792 - Hypothetical Protein, at 245039 to 245546 15792 mRNA_7425: 15793 - Hypothetical Protein, at 245564 to 246232 15793

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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244,167 - 15791 mRNA_7423 0.83 0.4
244,300 - 15791 mRNA_7423 0.87 0.1
244,346 - 15791 mRNA_7423 0.89 0.8
244,425 - -0.0
244,429 - 0.1
244,441 + -0.9
244,446 + -0.3
244,472 + 0.6
244,482 + 0.9
244,494 - -0.2
244,536 - -0.8
244,537 + -0.4
244,539 + 1.8
244,574 + 1.0
244,588 - -0.4
244,601 - 1.0
244,616 + 0.6
244,619 - 1.0
244,637 - 0.4
244,669 + 1.0
244,687 + 0.3
244,792 - -0.1
244,793 - 0.3
244,794 + 0.4
244,807 + 1.5
244,811 - 0.0
244,833 - 0.2
244,949 + 0.4
244,951 - 0.6
244,959 + 0.1
244,959 - 0.2
245,229 + 15792 mRNA_7424 0.37 2.2
245,398 - 15792 mRNA_7424 0.71 -0.5
245,711 + 15793 mRNA_7425 0.22 -0.1
245,812 + 15793 mRNA_7425 0.37 0.7
245,813 - 15793 mRNA_7425 0.37 0.8
246,267 + 0.1
246,270 + -0.1
246,282 + 0.9
246,427 + -0.1
246,428 + -0.4