Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7380

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7379: 15747 - SUPERFAMILY--SSF49344, at 134802 to 136760 15747 mRNA_7380: 15748 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 136989 to 140179 15748

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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136,050 + 15747 mRNA_7379 0.64 0.1
136,065 - 15747 mRNA_7379 0.64 1.0
136,186 + 15747 mRNA_7379 0.71 -1.4
136,539 + 15747 mRNA_7379 0.89 0.4
136,639 - 0.4
136,639 - 0.7
136,682 + 1.1
136,683 + 0.1
136,704 + -0.4
136,706 + 0.2
136,707 - 0.3
136,708 - 0.0
136,708 - 1.7
136,712 + 0.2
136,718 + -0.9
136,725 + 0.7
136,727 + -0.0
136,760 + 0.8
136,760 + 0.8
137,320 - 15748 mRNA_7380 0.10 -0.9
137,352 + 15748 mRNA_7380 0.11 1.0
138,726 + 15748 mRNA_7380 0.54 1.2
138,917 + 15748 mRNA_7380 0.60 1.4
139,058 - 15748 mRNA_7380 0.65 0.8
139,648 + 15748 mRNA_7380 0.83 1.0
139,651 + 15748 mRNA_7380 0.83 0.9
139,661 + 15748 mRNA_7380 0.84 -0.5
139,794 + 15748 mRNA_7380 0.88 1.1
139,795 - 15748 mRNA_7380 0.88 1.4
140,092 + 2.1
140,092 + 0.6
140,111 - 0.5
140,114 + -0.8
140,120 + 0.2
140,244 - 0.5
140,266 + -0.3
140,266 + 0.3
140,281 + 0.2
140,400 - 0.6
140,549 + 0.4
140,687 - 1.1
140,811 + -1.1
140,959 - 0.3
140,992 + -1.1
140,995 + 0.7
141,001 + 0.2
141,002 - 0.0