Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7294

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7293: 15661 - Hypothetical Protein, at 1321183 to 1322494 15661 mRNA_7294: 15662 - HMMPfam-F-box-like-PF12937, at 1323105 to 1324702 15662 mRNA_7295: 15663 - K10967 KTR1_3 alpha 1,2-mannosyltransferase, at 1324982 to 1326744 15663

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,322,455 + 0.6
1,322,474 - -0.0
1,322,552 - 0.0
1,322,562 + 0.7
1,322,575 + -0.1
1,322,709 - 1.1
1,322,710 + -0.1
1,322,735 + 1.1
1,322,853 + 0.3
1,322,878 + -0.1
1,322,918 + 0.1
1,323,044 + 0.1
1,323,110 + 0.1
1,323,153 - 0.5
1,323,158 - 0.3
1,323,161 + 0.5
1,323,244 - 0.4
1,323,340 - 15662 mRNA_7294 0.15 1.3
1,323,601 + 15662 mRNA_7294 0.31 1.5
1,324,029 - 15662 mRNA_7294 0.58 0.8
1,324,170 - 15662 mRNA_7294 0.67 0.1
1,324,331 - 15662 mRNA_7294 0.77 0.8
1,324,335 - 15662 mRNA_7294 0.77 0.2
1,324,335 - 15662 mRNA_7294 0.77 1.4
1,324,455 - 15662 mRNA_7294 0.84 0.3
1,324,456 + 15662 mRNA_7294 0.85 1.4
1,324,469 - 15662 mRNA_7294 0.85 0.5
1,324,579 - 0.6
1,324,612 + 0.3
1,324,618 + 0.2
1,324,639 + 0.2
1,324,802 - 0.5
1,324,915 - -0.1
1,324,925 - 1.2
1,324,941 - -1.0
1,324,981 + 0.6
1,325,036 + -0.1
1,325,038 + -0.6
1,325,043 - -2.4
1,325,098 + 0.8
1,325,115 - 1.1
1,325,238 + 15663 mRNA_7295 0.15 0.6
1,325,243 + 15663 mRNA_7295 0.15 0.2
1,325,258 - 15663 mRNA_7295 0.16 0.7
1,325,536 - 15663 mRNA_7295 0.31 -1.1
1,325,691 - 15663 mRNA_7295 0.40 -0.1