Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7233

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7232: 15600 - K10572 IPPK inositol-pentakisphosphate 2-kinase, at 1186072 to 1187585 15600 mRNA_7233: 15601 - Hypothetical Protein, at 1187693 to 1188676 15601 mRNA_7234: 15602 - HMMPfam-Mitochondrial ribosomal protein subunit-PF11709, at 1188848 to 1190629 15602

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,187,574 + 1.4
1,187,583 - 0.7
1,187,714 + 0.2
1,187,726 - -1.0
1,187,993 - 15601 mRNA_7233 0.30 1.0
1,188,424 - 15601 mRNA_7233 0.74 0.5
1,188,432 + 15601 mRNA_7233 0.75 -0.6
1,188,581 - 0.9
1,188,585 - 0.5
1,188,585 - -0.7
1,188,600 + 0.7
1,188,605 + 0.5
1,188,635 + 1.9
1,188,689 + 0.7
1,188,725 - 0.2
1,188,749 - 0.1
1,188,754 - 0.2