Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7179

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7178: 15546 - KOG0417 Ubiquitin-protein ligase, at 1058838 to 1059935 15546 mRNA_7179: 15547 - Hypothetical Protein, at 1060340 to 1061881 15547 mRNA_7180: 15548 - Hypothetical Protein, at 1062711 to 1064267 15548

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,059,597 - 15546 mRNA_7178 0.69 0.3
1,059,888 + 0.4
1,059,896 - 0.7
1,060,017 - 0.8
1,060,026 + 0.1
1,060,031 + 0.5
1,060,032 + -0.3
1,060,056 + 0.3
1,060,201 + 0.0
1,060,325 + -0.5
1,060,444 - -0.5
1,060,478 - 1.0
1,060,499 + 15547 mRNA_7179 0.10 1.5
1,061,200 + 15547 mRNA_7179 0.56 -0.5
1,061,315 - 15547 mRNA_7179 0.63 -0.7
1,062,102 - 0.0
1,062,208 + -0.0
1,062,270 + -0.0
1,062,368 - 0.2
1,062,444 + -0.3
1,062,708 - 0.4
1,062,829 - 0.3
1,062,847 + -0.3