Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7149

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7148: 15516 - KOG2246 Galactosyltransferases, at 995963 to 997965 15516 mRNA_7149: 15517 - K12733 PPIL1 peptidyl-prolyl cis-trans isomerase-like 1, at 998100 to 998920 15517 mRNA_7150: 15518 - K01874 MARS, metG methionyl-tRNA synthetase, at 999141 to 1001312 15518

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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997,920 + 0.6
998,061 + 0.7
998,061 + 0.8
998,062 - 0.2
998,242 + 15517 mRNA_7149 0.17 0.3
998,309 - 15517 mRNA_7149 0.25 -0.7
998,664 + 15517 mRNA_7149 0.69 0.7
998,681 + 15517 mRNA_7149 0.71 1.7
998,770 + 15517 mRNA_7149 0.82 0.3
998,795 + 15517 mRNA_7149 0.85 -0.1
998,801 - 15517 mRNA_7149 0.85 0.6
998,812 - 15517 mRNA_7149 0.87 1.3
998,941 + 0.0
998,956 + 1.2
999,083 - 1.1
999,087 - 0.4
999,129 - -0.1