Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7115

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7114: 15482 - K00383 GSR, gor glutathione reductase (NADPH), at 913071 to 914998 15482 mRNA_7115: 15483 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 915636 to 918075 15483 mRNA_7116: 15484 - K04393 CDC42 cell division control protein 42, at 918589 to 919535 15484

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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915,355 + 0.6
915,364 - 0.7
915,367 - -0.2
915,367 + 0.6
915,371 + 0.1
915,371 + 1.5
915,372 - -0.0
915,382 + 0.5
915,387 + -0.1
915,404 + -1.7
915,492 - -0.8
915,647 + 0.8
915,672 - 0.4
915,794 - 0.3
916,001 + 15483 mRNA_7115 0.15 1.2
916,242 - 15483 mRNA_7115 0.25 0.6
916,350 - 15483 mRNA_7115 0.29 -0.2
916,442 + 15483 mRNA_7115 0.33 -0.1
916,682 - 15483 mRNA_7115 0.43 -0.2
917,000 + 15483 mRNA_7115 0.56 0.1
917,602 + 15483 mRNA_7115 0.81 -0.5
917,728 + 15483 mRNA_7115 0.86 1.6
917,863 - 1.0
917,880 + 0.2
917,999 - -0.3
918,120 - -0.1
918,144 + 0.8
918,147 - 0.0
918,153 - 0.3
918,153 + 1.0
918,153 + 0.5
918,166 - 0.5
918,186 - -0.9
918,192 + 0.3
918,305 - -0.3
918,445 + -0.8
918,736 + 15484 mRNA_7116 0.16 0.9
918,863 - 15484 mRNA_7116 0.29 0.8