Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7112

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7111: 15479 - Interpro Subunit 11 of the general transcription factor TFIIH, at 908449 to 909688 15479 mRNA_7112: 15480 - Interpro DNA-directed RNA polymerase I subunit RPA34.5 0, at 910088 to 911391 15480 mRNA_7113: 15481 - Hypothetical Protein, at 911603 to 912181 15481

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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909,154 - 15479 mRNA_7111 0.57 0.2
909,438 + 15479 mRNA_7111 0.80 1.6
909,592 + -0.3
909,596 + 0.7
909,730 - 1.1
909,751 - 0.9
909,878 - -0.1
909,883 + 0.1
909,885 + -0.1
909,886 - 0.5
909,892 - -0.8
909,897 + -0.3
909,903 + -0.6
909,905 - 0.5
909,906 - -1.6
910,018 + 0.5
910,020 + -1.0
910,029 - -0.5
910,029 + -0.1
910,046 - 0.1
910,068 + 0.5
910,174 - -0.3
910,440 + 15480 mRNA_7112 0.27 0.5
910,452 - 15480 mRNA_7112 0.28 -0.4
910,535 + 15480 mRNA_7112 0.34 0.8
910,929 + 15480 mRNA_7112 0.64 -0.1
910,966 + 15480 mRNA_7112 0.67 0.4
911,660 - 0.0
911,943 - 15481 mRNA_7113 0.59 -0.4
912,104 - 15481 mRNA_7113 0.87 -1.0