Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7082

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7081: 15449 - K00272 DDO D-aspartate oxidase, at 836490 to 837896 15449 mRNA_7082: 15450 - K20406 NPRL3 nitrogen permease regulator 3-like protein, at 838009 to 840569 15450 mRNA_7083: 15451 - K18803 HPM1 protein-histidine N-methyltransferase, at 840577 to 841991 15451

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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837,515 + 15449 mRNA_7081 0.73 0.1
837,670 - 15449 mRNA_7081 0.84 -1.4
837,831 - -1.1
837,838 + 1.0
837,966 - 0.1
837,967 - 0.3
837,982 + 0.6
837,992 - -0.2
838,007 - -1.0
838,008 + 0.2
838,015 + 0.3
838,137 + 0.1
838,279 - 15450 mRNA_7082 0.11 -0.3
838,901 + 15450 mRNA_7082 0.35 0.3
839,488 + 15450 mRNA_7082 0.58 -0.2
840,067 - 15450 mRNA_7082 0.80 1.0
840,193 - 15450 mRNA_7082 0.85 1.3
841,411 + 15451 mRNA_7083 0.59 -0.4