Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7070

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7069: 15437 - HMMPfam-DNA-directed RNA polymerase III subunit Rpc31-PF11705, at 806497 to 812015 15437 mRNA_7070: 15438 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 812673 to 814209 15438 mRNA_7071: 15439 - BLAST histone H3 h3.1 [Schizosaccharomyces japonicus yF..., at 814580 to 815327 15439

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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811,993 + 0.3
812,128 - 0.4
812,131 + 0.5
812,141 - -0.4
812,150 + 0.8
812,192 - 0.1
812,226 - 2.4
812,226 - 0.7
812,248 + 1.3
812,253 + 1.2
812,254 + -0.7
812,258 - 0.6
812,261 + 0.7
812,281 + -0.0
812,286 - 0.6
812,294 - 0.2
812,318 - -0.1
812,323 - 0.1
812,324 + -0.3
812,339 - 0.0
812,377 - 0.6
812,402 + 1.8
812,405 - -0.0
812,406 - -0.3
812,415 + 0.2
812,416 - 0.7
812,416 + 0.9
812,424 - -0.3
812,424 + 1.0
812,426 - 0.4
812,449 - -0.6
812,463 - 0.1
812,466 + 0.2
812,469 + 1.3
812,485 - -0.2
812,489 + 1.5
812,490 + 0.2
812,608 - -0.1
812,612 - 1.3
812,628 + -0.0
812,779 + 0.3
813,158 - 15438 mRNA_7070 0.32 0.2
813,189 + 15438 mRNA_7070 0.34 0.8
813,342 - 15438 mRNA_7070 0.44 0.6
813,430 - 15438 mRNA_7070 0.49 0.3
813,478 - 15438 mRNA_7070 0.52 1.0
813,481 - 15438 mRNA_7070 0.53 0.4
813,491 + 15438 mRNA_7070 0.53 -0.4
813,730 + 15438 mRNA_7070 0.69 0.3
813,825 + 15438 mRNA_7070 0.75 2.1
814,067 - 1.3
814,185 + 1.2
814,322 + -0.7
814,333 + 0.3
814,344 - 0.3
814,354 - 1.3
814,357 - -0.1
814,357 + 0.8
814,368 + 0.5
814,407 - -0.1
814,417 - 0.4
814,472 - -0.3
814,478 - 0.4
814,532 + 2.0
814,652 + -0.8
814,665 - 15439 mRNA_7071 0.11 1.2
814,807 - 15439 mRNA_7071 0.30 0.2
814,820 - 15439 mRNA_7071 0.32 0.8