Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7015

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678211 to 680397 15383 mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680551 to 683526 15384

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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677,376 + 0.9
677,668 - 0.3
677,939 - 1.8
678,090 + 0.1
678,091 + -0.5
678,262 + -0.7
678,277 - 1.8
678,384 - -0.2
678,403 + 0.5
678,405 - 0.4
678,529 - 15383 mRNA_7015 0.15 0.1
678,691 - 15383 mRNA_7015 0.22 2.0
678,985 - 15383 mRNA_7015 0.35 0.6
679,036 + 15383 mRNA_7015 0.38 -0.5
679,572 - 15383 mRNA_7015 0.62 1.3
679,869 - 15383 mRNA_7015 0.76 0.4
680,157 - 15383 mRNA_7015 0.89 0.5
680,585 + 0.2
680,694 - 0.1
680,711 + -0.5
680,745 + 0.6
680,749 + 0.5
681,158 - 15384 mRNA_7016 0.20 1.5
681,343 - 15384 mRNA_7016 0.27 1.8