Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6975

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574442 to 577802 15342 mRNA_6975: 15343 - Hypothetical Protein, at 578459 to 580488 15343

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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577,638 + -0.4
577,663 - 1.3
577,670 + -0.1
577,803 + 0.2
577,804 - 1.0
577,814 + -0.4
577,933 + 0.2
577,950 - 0.2
577,958 + 1.0
577,962 + 0.6
577,964 + 1.8
577,967 + -0.2
577,977 + 1.1
577,981 - 0.4
577,981 + -0.1
578,087 - 0.4
578,110 + -0.1
578,327 + -0.2
578,418 - 0.7
578,715 + 15343 mRNA_6975 0.13 -0.0
579,001 + 15343 mRNA_6975 0.27 -0.7
579,150 - 15343 mRNA_6975 0.34 -0.1
579,285 + 15343 mRNA_6975 0.41 -0.8
579,565 - 15343 mRNA_6975 0.54 -0.9
579,586 - 15343 mRNA_6975 0.56 -0.5
579,587 - 15343 mRNA_6975 0.56 -0.3
579,737 - 15343 mRNA_6975 0.63 0.0
580,034 - 15343 mRNA_6975 0.78 0.0
580,045 - 15343 mRNA_6975 0.78 -0.1
580,184 + 15343 mRNA_6975 0.85 0.3
580,331 - 1.4
580,333 + 0.1
580,342 + -0.4
580,350 + 0.7
580,350 + 0.9
580,364 - -0.1
580,378 + 0.7
580,490 - 1.1
580,497 + 0.3
580,539 + -0.3
580,641 - 1.1
580,644 + -0.4
580,645 - 0.4
580,647 + 0.5
580,651 + -0.2
580,653 + 1.3
580,664 + 1.1
580,677 - -0.3
580,789 - 0.3
580,790 + 0.8
580,798 - 1.9
580,799 + 0.7
580,799 - 0.0
580,801 + -0.3
580,804 - 0.7
580,808 + -0.1
580,810 - 0.5
580,816 - 1.1
580,816 - 0.4
580,817 - -0.0
580,819 + 0.3
580,823 + 0.1
580,824 + 0.8
580,825 - 0.1
580,828 + 0.0
580,828 + 0.3
580,829 - 0.2
580,829 + -0.3
580,831 + 0.4
580,834 - 0.0
580,835 - 0.5
580,843 - 0.4
580,849 + -0.0
580,849 + 0.6
580,849 + 0.8
580,849 + -0.1
580,851 + 0.1
580,884 + 1.1
580,902 - 0.7
580,909 + -1.7
580,913 - -0.1
580,917 + 0.7
580,920 - 0.0
580,924 + -0.6
580,925 + 0.3
580,928 + 0.4
580,931 + 1.0
580,938 + 0.3
580,939 + 1.7
580,944 + 1.7
580,944 - -0.3
580,952 + -0.5
580,952 - -0.6
580,959 + 0.6
580,987 - 0.6
581,029 + 0.5
581,087 + -0.1
581,089 - -0.7
581,090 - 0.5
581,091 + 0.2
581,096 - 0.6
581,097 + 0.1
581,113 + -0.5
581,129 - 0.3
581,137 + -1.9
581,144 + 0.3
581,224 - -0.2
581,227 - 1.5
581,235 + 0.8
581,243 - 0.3
581,246 - 0.7
581,258 + -0.8
581,262 + 0.4
581,268 + 0.7
581,400 + 1.4
581,412 - 0.4
581,412 - 0.1
581,423 + 0.6
581,475 + 0.0
581,478 + 0.0
581,488 + 0.5