Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6952

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6951: 15319 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 510991 to 511843 15319 mRNA_6952: 15320 - K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48, at 512124 to 517290 15320 mRNA_6953: 15321 - K13719 OTU1, YOD1 ubiquitin thioesterase OTU1, at 517419 to 518782 15321

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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511,382 + 15319 mRNA_6951 0.46 -0.2
511,393 + 15319 mRNA_6951 0.47 1.1
512,292 - 1.2
512,302 + 1.6
512,844 + 15320 mRNA_6952 0.14 -0.1
512,993 - 15320 mRNA_6952 0.17 0.3
513,136 - 15320 mRNA_6952 0.20 -0.4
513,621 - 15320 mRNA_6952 0.29 0.6
514,193 + 15320 mRNA_6952 0.40 0.0
514,601 - 15320 mRNA_6952 0.48 0.7
514,928 + 15320 mRNA_6952 0.54 0.9
515,166 + 15320 mRNA_6952 0.59 -0.6
515,206 + 15320 mRNA_6952 0.60 0.7
515,770 + 15320 mRNA_6952 0.71 0.0
516,203 - 15320 mRNA_6952 0.79 0.4
516,762 + 15320 mRNA_6952 0.90 0.6
516,765 + 15320 mRNA_6952 0.90 1.7
516,769 + 15320 mRNA_6952 0.90 0.4
516,906 + 0.6
517,043 - 0.7
517,054 - -0.4
517,182 - 0.2
517,216 - 0.3
517,302 - -0.2
517,321 - 0.1
517,502 + 0.4
517,690 - 15321 mRNA_6953 0.20 1.0
517,965 + 15321 mRNA_6953 0.40 0.4
517,995 + 15321 mRNA_6953 0.42 -0.1