Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6949

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6948: 15316 - BLAST putative ephrin type-a receptor 8-like protein [Botry..., at 505314 to 506461 15316 mRNA_6949: 15317 - HMMPfam-Cenp-O kinetochore centromere component-PF09496, at 506847 to 507636 15317

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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506,113 + 15316 mRNA_6948 0.70 0.3
506,114 + 15316 mRNA_6948 0.70 0.3
506,400 + 0.4
506,408 + -0.0
506,415 - 0.5
506,426 + -0.4
506,539 + 0.1
506,539 - -0.4
506,549 - -0.0
506,560 - -0.0
506,568 - 0.2
506,570 + 0.5
506,575 + 0.9
506,575 + -0.0
506,582 - -0.7
506,588 + 0.2
506,652 - 0.4
506,655 + -1.0
506,672 - 0.2
506,679 + 1.2
506,695 + 0.7
506,713 - 0.8
506,849 + 0.4
506,970 + 15317 mRNA_6949 0.16 0.5
506,980 - 15317 mRNA_6949 0.17 0.3
506,987 - 15317 mRNA_6949 0.18 0.4
507,575 + 1.8
507,850 + 1.0
507,964 - 0.5
507,991 - 0.3
508,079 - 1.4
508,148 + 0.8
508,263 - 0.2
508,272 - -0.0
508,274 - 1.6
508,275 - 0.3
508,276 - 1.4
508,288 + 0.8
508,290 - 1.0
508,296 - 0.7
508,297 - 0.4
508,299 - -0.1
508,304 + 0.7
508,304 + 0.1
508,310 + 0.9
508,319 + 0.0
508,328 + 0.0
508,449 - 0.7
508,449 - -0.0
508,473 + 0.8
508,479 - 1.3
508,610 + 1.1