Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6943

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6942: 15310 - K15029 EIF3L translation initiation factor 3 subunit L, at 491144 to 493608 15310 mRNA_6943: 15311 - SUPERFAMILY--SSF52047, at 493796 to 495109 15311 mRNA_6944: 15312 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 495585 to 496942 15312

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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493,289 - 15310 mRNA_6942 0.87 1.7
493,292 + 15310 mRNA_6942 0.87 1.0
493,434 - 1.2
493,440 + 0.2
493,506 + 0.7
493,854 - 0.9
493,894 + 0.2
494,151 - 15311 mRNA_6943 0.27 0.2
494,172 + 15311 mRNA_6943 0.29 0.2
494,444 + 15311 mRNA_6943 0.49 0.8
495,065 - 0.9
495,084 + 0.1
495,198 - 0.4
495,205 + -0.0
495,215 + -0.9
495,623 - 0.2
495,629 - 0.7
495,635 + 0.1
495,636 - 0.3